EnhancerDB
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  3. rs6538452[chr12:94169009]
Enhancers that have rs6538452[chr12:94169009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 94163885 94183295 enh14903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6538452[chr12:94169009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 94169000 94169014 GATA2 JASPAR yes 122881014
chr12 94169007 94169018 USF1 JASPAR yes 122881016
chr12 94169007 94169018 USF2 JASPAR yes 122881017
chr12 94169008 94169018 TFE3 JASPAR yes 122881018
chr12 94169008 94169018 TFEB JASPAR yes 122881019
chr12 94169008 94169018 TFEC JASPAR yes 122881020
Genes associated with rs6538452[chr12:94169009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More