EnhancerDB
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  3. rs654886[chr2:220556649]
Enhancers that have rs654886[chr2:220556649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 220543985 220559335 enh6158
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs654886[chr2:220556649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 220556649 220556660 HOXC11 JASPAR yes 81047000
chr2 220556649 220556660 HOXC12 JASPAR yes 81047001
chr2 220556649 220556660 HOXD12 JASPAR yes 81047002
chr2 220556649 220556664 MEF2A JASPAR yes 81047003
Genes associated with rs654886[chr2:220556649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 219646472 219680016 + CYP27A1 ENSG00000135929.4 219646472 876633 Uterus 0.146634 3151