EnhancerDB
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  3. rs6556311[chr5:157349729]
Enhancers that have rs6556311[chr5:157349729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 157334581 157359995 enh22754
Brain (SK-N-MC) Liver Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Lung Muscle (A673) Heart
Transcript factors that have rs6556311[chr5:157349729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 157349718 157349729 PHOX2A JASPAR yes 67183760
chr5 157349718 157349729 PROP1 JASPAR yes 67183761
chr5 157349720 157349730 MEF2A JASPAR yes 67183762
chr5 157349721 157349731 ALX3 JASPAR yes 67183764
chr5 157349721 157349731 GSX1 JASPAR yes 67183765
chr5 157349721 157349731 MEOX1 JASPAR yes 67183766
chr5 157349722 157349730 LBX1 JASPAR yes 67183767
chr5 157349722 157349730 PDX1 JASPAR yes 67183768
chr5 157349722 157349730 VAX1 JASPAR yes 67183769
chr5 157349722 157349730 VAX2 JASPAR yes 67183770
chr5 157349722 157349730 VSX1 JASPAR yes 67183771
chr5 157349722 157349730 VSX2 JASPAR yes 67183772
chr5 157349722 157349732 POU6F2 JASPAR yes 67183773
chr5 157349729 157349745 POU4F3 JASPAR yes 67183774
Genes associated with rs6556311[chr5:157349729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More