EnhancerDB
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  3. rs6577557[chr1:9223556]
Enhancers that have rs6577557[chr1:9223556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9220009 9228971 enh11480
Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs6577557[chr1:9223556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9223516 9224146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802006
chr1 9223516 9224146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802007
chr1 9223545 9223563 RARA JASPAR yes 26624128
Genes associated with rs6577557[chr1:9223556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More