EnhancerDB
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  3. rs6580868[chr12:52612993]
Enhancers that have rs6580868[chr12:52612993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6580868[chr12:52612993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52612752 52613477 ZNF143 GTRD no Epithelial (MCF-7) 21546836
chr12 52612804 52613302 ZNF143 GTRD no Epithelial (MCF-7) 21546837
chr12 52612836 52613302 ZNF143 GTRD no Epithelial (MCF-7) 21546838
chr12 52612988 52612998 POU6F2 JASPAR yes 120929677
Genes associated with rs6580868[chr12:52612993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More