EnhancerDB
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  3. rs6582623[chr12:46613394]
Enhancers that have rs6582623[chr12:46613394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs6582623[chr12:46613394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46613391 46613401 ALX3 JASPAR yes 120604947
chr12 46613391 46613401 ESX1 JASPAR yes 120604948
chr12 46613391 46613401 GSX1 JASPAR yes 120604949
chr12 46613391 46613401 GSX2 JASPAR yes 120604950
chr12 46613391 46613401 HOXB2 JASPAR yes 120604951
chr12 46613391 46613401 HOXB3 JASPAR yes 120604952
chr12 46613391 46613401 LBX2 JASPAR yes 120604953
chr12 46613391 46613401 LHX2 JASPAR yes 120604954
chr12 46613391 46613401 MEOX1 JASPAR yes 120604955
chr12 46613391 46613401 MEOX2 JASPAR yes 120604956
chr12 46613391 46613401 MIXL1 JASPAR yes 120604957
chr12 46613391 46613401 MNX1 JASPAR yes 120604958
chr12 46613391 46613401 NOTO JASPAR yes 120604959
chr12 46613392 46613400 BSX JASPAR yes 120604960
chr12 46613392 46613400 DLX6 JASPAR yes 120604961
chr12 46613392 46613400 EN1 JASPAR yes 120604962
chr12 46613392 46613400 ISX JASPAR yes 120604963
chr12 46613392 46613400 LBX1 JASPAR yes 120604964
chr12 46613392 46613400 LHX9 JASPAR yes 120604965
chr12 46613392 46613400 LMX1A JASPAR yes 120604966
chr12 46613392 46613400 LMX1B JASPAR yes 120604967
chr12 46613392 46613400 NKX6-1 JASPAR yes 120604968
chr12 46613392 46613400 NKX6-2 JASPAR yes 120604969
chr12 46613392 46613400 PAX4 JASPAR yes 120604970
chr12 46613392 46613400 PDX1 JASPAR yes 120604971
chr12 46613392 46613400 PRRX1 JASPAR yes 120604972
chr12 46613392 46613400 RAX2 JASPAR yes 120604973
chr12 46613392 46613400 SHOX JASPAR yes 120604974
chr12 46613392 46613400 UNCX JASPAR yes 120604975
chr12 46613392 46613400 VAX1 JASPAR yes 120604976
chr12 46613392 46613400 VAX2 JASPAR yes 120604977
chr12 46613392 46613400 VSX1 JASPAR yes 120604978
chr12 46613392 46613400 VSX2 JASPAR yes 120604979
chr12 46613392 46613402 HOXB13 JASPAR yes 120604980
chr12 46613392 46613402 HOXD13 JASPAR yes 120604981
Genes associated with rs6582623[chr12:46613394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More