EnhancerDB
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  3. rs6582642[chr12:46793017]
Enhancers that have rs6582642[chr12:46793017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46792249 46810655 enh47577
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Thyroid Peripheral Blood (MM.1S) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs6582642[chr12:46793017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46792628 46794635 AR GTRD no Prostate (PC-3) 21541362
chr12 46792711 46793433 ZNF274 GTRD no Liver (HepG2) 21541363
chr12 46792856 46793259 ZNF274 GTRD no Liver (HepG2) 21541364
chr12 46792871 46793225 ZNF274 GTRD no Liver (HepG2) 21541365
chr12 46792881 46793432 ZNF274 GTRD no Liver (HepG2) 21541366
chr12 46792911 46793205 ZNF274 GTRD no Liver (HepG2) 21541367
chr12 46792918 46793204 ZNF274 GTRD no Liver (HepG2) 21541368
chr12 46793011 46793022 CDX2 JASPAR yes 120615753
chr12 46793011 46793022 RUNX1 JASPAR yes 120615754
chr12 46793012 46793023 HOXA10 JASPAR yes 120615755
chr12 46793013 46793022 CDX1 JASPAR yes 120615756
chr12 46793013 46793023 HOXA13 JASPAR yes 120615757
chr12 46793013 46793023 HOXB13 JASPAR yes 120615758
chr12 46793013 46793023 HOXD13 JASPAR yes 120615759
Genes associated with rs6582642[chr12:46793017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More