EnhancerDB
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  3. rs6586358[chr1:235115954]
Enhancers that have rs6586358[chr1:235115954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6586358[chr1:235115954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235113519 235117302 POLR2A UCSC Txn Factor no Conserved 107885189
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402321
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885192
chr1 235115683 235116007 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21402492
chr1 235115747 235116003 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21402495
chr1 235115749 235115993 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402496
chr1 235115753 235115983 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402497
chr1 235115755 235115985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402498
chr1 235115765 235116009 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21402499
chr1 235115855 235116205 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402500
Genes associated with rs6586358[chr1:235115954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More