EnhancerDB
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  3. rs6589946[chr11:122586211]
Enhancers that have rs6589946[chr11:122586211]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr11 122586167 122586342 vista11879
VISTA
Transcript factors that have rs6589946[chr11:122586211]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122586048 122586518 ZNF274 GTRD no Bone Marrow (K562) 108004404
chr11 122586109 122586549 ZNF274 GTRD no Liver (HepG2) 21519686
chr11 122586109 122586549 ZNF274 GTRD no Liver (HepG2) 108004405
chr11 122586110 122586527 ZNF274 GTRD no Liver (HepG2) 21519687
chr11 122586110 122586527 ZNF274 GTRD no Liver (HepG2) 108004406
chr11 122586118 122586470 ZNF274 GTRD no Liver (HepG2) 21519688
chr11 122586118 122586470 ZNF274 GTRD no Liver (HepG2) 108004407
chr11 122586209 122586215 NFIC JASPAR yes 42023407
chr11 122586209 122586215 NFIC JASPAR yes 114146158
Genes associated with rs6589946[chr11:122586211], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More