EnhancerDB
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  3. rs6604616[chr1:218646954]
Enhancers that have rs6604616[chr1:218646954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218644305 218676855 enh12672
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6604616[chr1:218646954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218645086 218647040 ZBTB33 GTRD no Lung (A549) 107870355
chr1 218645593 218647190 ZBTB33 GTRD no Lung (A549) 107870356
chr1 218645650 218647045 ZBTB33 GTRD no Lung (A549) 107870357
chr1 218645720 218647182 ZBTB33 GTRD no Lung (A549) 107870358
chr1 218645760 218647561 ZNF143 GTRD no Epithelial (MCF-7) 21380796
chr1 218645760 218647561 ZNF143 GTRD no Epithelial (MCF-7) 107870359
chr1 218645800 218647196 ZBTB33 GTRD no Lung (A549) 107870360
chr1 218645848 218646991 ZNF143 GTRD no Epithelial (MCF-7) 21380797
chr1 218645952 218647065 ZNF143 GTRD no Epithelial (MCF-7) 21380800
chr1 218645952 218647065 ZNF143 GTRD no Epithelial (MCF-7) 107870361
chr1 218646002 218647162 ZNF143 GTRD no Epithelial (MCF-7) 21380801
chr1 218646002 218647162 ZNF143 GTRD no Epithelial (MCF-7) 107870362
chr1 218646004 218647232 ZBTB33 GTRD no Lung (A549) 107870363
chr1 218646143 218647009 ZNF143 GTRD no Epithelial (MCF-7) 21380811
chr1 218646221 218647043 ZNF274 GTRD no Liver (HepG2) 107870364
chr1 218646317 218647027 ZNF274 GTRD no Liver (HepG2) 107870365
chr1 218646941 218646956 STAT2 JASPAR yes 35383241
chr1 218646942 218646956 STAT1 JASPAR yes 35383242
chr1 218646942 218646963 ZNF263 JASPAR yes 35383243
chr1 218646945 218646966 ZNF263 JASPAR yes 35383245
chr1 218646946 218646961 PRDM1 JASPAR yes 35383247
chr1 218646950 218646960 MZF1 JASPAR yes 35383248
chr1 218646953 218646959 SP1 TRANSFAC yes 35383249
chr1 218646953 218646963 SP1 JASPAR yes 35383250
Genes associated with rs6604616[chr1:218646954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More