EnhancerDB
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  3. rs6604979[chr1:25099438]
Enhancers that have rs6604979[chr1:25099438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6604979[chr1:25099438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25099424 25099438 POU4F1 JASPAR yes 27530090
chr1 25099428 25099442 FOXF2 JASPAR yes 27530093
chr1 25099437 25099441 ESR1 TRANSFAC yes 27530096
Genes associated with rs6604979[chr1:25099438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More