EnhancerDB
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  3. rs661316[chr1:39631297]
Enhancers that have rs661316[chr1:39631297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39628825 39647095 enh11760
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 39629409 39631707 vista40
VISTA
Transcript factors that have rs661316[chr1:39631297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39631278 39631299 IRF1 JASPAR yes 28261178
chr1 39631278 39631299 IRF1 JASPAR yes 71129213
chr1 39631284 39631299 FOXP1 JASPAR yes 28261181
chr1 39631284 39631299 FOXP1 JASPAR yes 71129216
Genes associated with rs661316[chr1:39631297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More