EnhancerDB
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  3. rs6656288[chr1:218666429]
Enhancers that have rs6656288[chr1:218666429]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218644305 218676855 enh12672
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 218666268 218666506 vista5115
VISTA
Transcript factors that have rs6656288[chr1:218666429]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218666049 218666619 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21380886
chr1 218666049 218666619 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107870428
chr1 218666159 218666629 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21380887
chr1 218666159 218666629 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107870429
chr1 218666183 218666593 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107870430
chr1 218666229 218666569 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21380888
chr1 218666229 218666569 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107870431
chr1 218666230 218666542 GATA2 UCSC Txn Factor no Conserved 107870432
chr1 218666242 218666562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21380889
chr1 218666242 218666562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107870433
chr1 218666262 218666592 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21380890
chr1 218666262 218666592 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107870434
chr1 218666270 218666614 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21380891
chr1 218666270 218666614 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107870435
chr1 218666292 218666548 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21380892
chr1 218666292 218666548 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107870436
chr1 218666292 218666556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21380893
chr1 218666292 218666556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107870437
chr1 218666424 218666430 SOX10 JASPAR yes 35386895
chr1 218666424 218666430 SOX10 JASPAR yes 118459283
chr1 218666426 218666440 GATA2 JASPAR yes 35386896
chr1 218666426 218666440 GATA2 JASPAR yes 118459284
chr1 218666428 218666436 GATA3 JASPAR yes 35386897
chr1 218666428 218666436 GATA5 JASPAR yes 35386898
chr1 218666428 218666436 GATA3 JASPAR yes 118459285
chr1 218666428 218666436 GATA5 JASPAR yes 118459286
Genes associated with rs6656288[chr1:218666429], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More