EnhancerDB
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  3. rs6657543[chr1:235112417]
Enhancers that have rs6657543[chr1:235112417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6657543[chr1:235112417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235111936 235112560 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402244
chr1 235112077 235114442 ZNF274 GTRD no Bone Marrow (K562) 21402262
chr1 235112077 235114442 ZNF274 GTRD no Bone Marrow (K562) 107885155
chr1 235112077 235114442 ZNF274 GTRD no Bone Marrow (K562) 107885156
chr1 235112151 235112701 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402264
chr1 235112221 235112677 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402265
chr1 235112236 235112860 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402266
chr1 235112236 235112860 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107885157
chr1 235112246 235114508 ZNF274 GTRD no Bone Marrow (K562) 21402267
chr1 235112246 235114508 ZNF274 GTRD no Bone Marrow (K562) 107885158
chr1 235112246 235114508 ZNF274 GTRD no Bone Marrow (K562) 107885159
chr1 235112274 235112638 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402268
chr1 235112276 235112732 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402269
chr1 235112294 235112550 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402270
chr1 235112308 235112588 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402271
chr1 235112335 235114199 ZNF274 GTRD no Bone Marrow (K562) 21402272
chr1 235112335 235114199 ZNF274 GTRD no Bone Marrow (K562) 107885160
chr1 235112335 235114199 ZNF274 GTRD no Bone Marrow (K562) 107885161
chr1 235112341 235112617 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402273
chr1 235112363 235112911 ZNF274 GTRD no Cervix (HeLa-S3) 21402274
chr1 235112363 235112911 ZNF274 GTRD no Cervix (HeLa-S3) 107885162
chr1 235112399 235112902 ZNF274 GTRD no Liver (HepG2) 21402275
chr1 235112399 235112902 ZNF274 GTRD no Liver (HepG2) 107885163
chr1 235112405 235112721 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402276
chr1 235112409 235112852 ZNF274 GTRD no Bone Marrow (K562) 21402277
chr1 235112409 235112852 ZNF274 GTRD no Bone Marrow (K562) 107885164
Genes associated with rs6657543[chr1:235112417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More