EnhancerDB
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  3. rs6662561[chr1:235123148]
Enhancers that have rs6662561[chr1:235123148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6662561[chr1:235123148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235123049 235123553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402641
chr1 235123109 235123439 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402642
chr1 235123118 235123498 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402643
chr1 235123124 235123454 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402644
chr1 235123125 235123741 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402645
chr1 235123128 235123512 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402646
chr1 235123129 235123505 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402647
chr1 235123129 235123525 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402648
chr1 235123138 235123156 MAFF JASPAR yes 36338798
Genes associated with rs6662561[chr1:235123148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More