EnhancerDB
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  3. rs6665367[chr1:230279169]
Enhancers that have rs6665367[chr1:230279169]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6665367[chr1:230279169]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230278357 230279984 ZNF274 GTRD no Bone Marrow (K562) 21391505
chr1 230278357 230279984 ZNF274 GTRD no Bone Marrow (K562) 107878729
chr1 230279002 230279726 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21391506
chr1 230279002 230279726 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878730
chr1 230279121 230280071 POLR2A UCSC Txn Factor no Conserved 107878731
chr1 230279158 230279174 SOX8 JASPAR yes 36026007
chr1 230279162 230279170 TBX5 JASPAR yes 36026008
Genes associated with rs6665367[chr1:230279169], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More