EnhancerDB
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  3. rs6666276[chr1:225795385]
Enhancers that have rs6666276[chr1:225795385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6666276[chr1:225795385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225795380 225795385 TFAP2A TRANSFAC yes 35754797
chr1 225795380 225795386 MZF1 JASPAR yes 35754798
chr1 225795381 225795391 GSC2 JASPAR yes 35754799
chr1 225795381 225795391 GSC JASPAR yes 35754800
chr1 225795382 225795390 OTX1 JASPAR yes 35754801
chr1 225795382 225795390 OTX2 JASPAR yes 35754802
chr1 225795382 225795390 RHOXF1 JASPAR yes 35754803
chr1 225795382 225795391 PITX3 JASPAR yes 35754804
Genes associated with rs6666276[chr1:225795385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More