EnhancerDB
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  3. rs6666492[chr1:212782500]
Enhancers that have rs6666492[chr1:212782500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs6666492[chr1:212782500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212780052 212787859 POLR2A UCSC Txn Factor no Conserved 107869176
chr1 212780418 212782777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869178
chr1 212782479 212782500 IRF1 JASPAR yes 35141417
chr1 212782499 212782511 E2F1 JASPAR yes 35141426
chr1 212782500 212782511 E2F1 JASPAR yes 35141427
Genes associated with rs6666492[chr1:212782500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More