EnhancerDB
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  3. rs6668717[chr1:235115205]
Enhancers that have rs6668717[chr1:235115205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6668717[chr1:235115205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235112446 235115274 ZNF274 GTRD no Bone Marrow (K562) 21402280
chr1 235112446 235115274 ZNF274 GTRD no Bone Marrow (K562) 107885167
chr1 235112446 235115274 ZNF274 GTRD no Bone Marrow (K562) 107885168
chr1 235113519 235117302 POLR2A UCSC Txn Factor no Conserved 107885189
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402321
chr1 235113678 235117302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885192
chr1 235115194 235115209 NR2C2 JASPAR yes 36337655
chr1 235115197 235115207 SP1 JASPAR yes 36337657
chr1 235115198 235115213 TFAP2A JASPAR yes 36337658
chr1 235115198 235115213 TFAP2C JASPAR yes 36337659
chr1 235115198 235115219 ZNF263 JASPAR yes 36337660
chr1 235115200 235115212 INSM1 JASPAR yes 36337661
chr1 235115201 235115212 TFAP2A JASPAR yes 36337662
chr1 235115201 235115213 TFAP2A JASPAR yes 36337663
chr1 235115201 235115213 TFAP2B JASPAR yes 36337664
chr1 235115201 235115213 TFAP2C JASPAR yes 36337665
chr1 235115202 235115211 TFAP2A JASPAR yes 36337666
Genes associated with rs6668717[chr1:235115205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More