EnhancerDB
  1. Home
  2. SNP
  3. rs6669579[chr1:32428975]
Enhancers that have rs6669579[chr1:32428975]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 32415585 32431955 enh11723
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6669579[chr1:32428975]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 32428966 32428978 FOXI1 JASPAR yes 27969094
chr1 32428967 32428979 FOXC2 JASPAR yes 27969095
chr1 32428967 32428981 ONECUT2 JASPAR yes 27969096
chr1 32428967 32428981 ONECUT3 JASPAR yes 27969097
chr1 32428968 32428979 FOXC1 JASPAR yes 27969098
chr1 32428973 32428977 YY1 TRANSFAC yes 27969100
chr1 32428973 32428988 FOXP1 JASPAR yes 27969101
Genes associated with rs6669579[chr1:32428975], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 32826871 32829879 - FAM229A ENSG00000225828.1 32829879 397896 Adrenal 0.133541 457