EnhancerDB
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  3. rs6670246[chr1:1797390]
Enhancers that have rs6670246[chr1:1797390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6670246[chr1:1797390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1797376 1797391 FOXA1 JASPAR yes 26208958
chr1 1797377 1797392 FOXP1 JASPAR yes 26208960
chr1 1797378 1797390 FOXC2 JASPAR yes 26208961
chr1 1797378 1797392 ONECUT2 JASPAR yes 26208962
chr1 1797378 1797392 ONECUT3 JASPAR yes 26208963
chr1 1797379 1797390 FOXB1 JASPAR yes 26208964
chr1 1797379 1797390 FOXC1 JASPAR yes 26208965
chr1 1797381 1797396 FOXP1 JASPAR yes 26208967
chr1 1797381 1797402 IRF1 JASPAR yes 26208968
chr1 1797382 1797394 FOXC2 JASPAR yes 26208969
chr1 1797385 1797400 FOXP1 JASPAR yes 26208971
chr1 1797385 1797406 IRF1 JASPAR yes 26208972
chr1 1797386 1797401 FOXP1 JASPAR yes 26208973
chr1 1797387 1797402 FOXP1 JASPAR yes 26208974
chr1 1797388 1797403 FOXP1 JASPAR yes 26208975
Genes associated with rs6670246[chr1:1797390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More