EnhancerDB
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  3. rs6671126[chr1:171397015]
Enhancers that have rs6671126[chr1:171397015]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs6671126[chr1:171397015]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171396964 171397306 SOX2 GTRD no Neural Stem Cells (H9) 21349641
chr1 171397013 171397025 POU2F1 JASPAR yes 33079483
chr1 171397014 171397025 FOXA1 JASPAR yes 33079484
chr1 171397014 171397029 FOXA1 JASPAR yes 33079485
chr1 171397015 171397023 FOXL1 JASPAR yes 33079486
chr1 171397015 171397024 POU3F4 JASPAR yes 33079487
chr1 171397015 171397024 POU5F1B JASPAR yes 33079488
chr1 171397015 171397026 FOXB1 JASPAR yes 33079489
chr1 171397015 171397026 FOXC1 JASPAR yes 33079490
chr1 171397015 171397027 FOXC2 JASPAR yes 33079491
Genes associated with rs6671126[chr1:171397015], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More