EnhancerDB
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  3. rs6671998[chr1:207468423]
Enhancers that have rs6671998[chr1:207468423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207468191 207488755 enh12602
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs6671998[chr1:207468423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207468187 207469397 ZNF274 GTRD no Bone Marrow (K562) 21373563
chr1 207468413 207468428 RUNX2 JASPAR yes 34853762
chr1 207468416 207468427 RUNX1 JASPAR yes 34853763
chr1 207468417 207468427 RUNX3 JASPAR yes 34853764
chr1 207468417 207468437 RREB1 JASPAR yes 34853765
chr1 207468418 207468427 RUNX2 JASPAR yes 34853766
chr1 207468418 207468439 IRF1 JASPAR yes 34853767
chr1 207468420 207468435 STAT2 JASPAR yes 34853768
chr1 207468422 207468434 IRF1 JASPAR yes 34853769
chr1 207468422 207468436 ONECUT2 JASPAR yes 34853770
chr1 207468422 207468436 ONECUT3 JASPAR yes 34853771
chr1 207468423 207468435 IRF1 JASPAR yes 34853772
Genes associated with rs6671998[chr1:207468423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More