EnhancerDB
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  3. rs6675541[chr1:227544762]
Enhancers that have rs6675541[chr1:227544762]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227541685 227548089 enh12732
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Astrocyte Lung (A549) Stomach Placenta Adrenal Uterus Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs6675541[chr1:227544762]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227544381 227545191 ZNF143 GTRD no Epithelial (MCF-7) 21387894
chr1 227544522 227544806 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21387896
chr1 227544757 227544762 GATA2 JASPAR yes 35872015
Genes associated with rs6675541[chr1:227544762], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More