EnhancerDB
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  3. rs6675624[chr1:27866999]
Enhancers that have rs6675624[chr1:27866999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs6675624[chr1:27866999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27866892 27870463 ZNF274 GTRD no Bone Marrow (K562) 107802587
chr1 27866988 27866999 FOS JASPAR yes 27706963
chr1 27866988 27866999 JUND JASPAR yes 27706964
chr1 27866988 27866999 NFE2 JASPAR yes 27706965
chr1 27866993 27867001 DLX6 JASPAR yes 27706968
chr1 27866993 27867001 MSX1 JASPAR yes 27706969
chr1 27866998 27867013 TFAP2A JASPAR yes 27706970
Genes associated with rs6675624[chr1:27866999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 27331511 27339327 - FAM46B ENSG00000158246.7 27339327 527672 Uterus 0.453648 383