EnhancerDB
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  3. rs6677559[chr1:16128191]
Enhancers that have rs6677559[chr1:16128191]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6677559[chr1:16128191]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16128181 16128191 TBR1 JASPAR yes 27003174
chr1 16128181 16128194 SMAD2 JASPAR yes 27003175
chr1 16128185 16128196 FOSL2 JASPAR yes 27003176
Genes associated with rs6677559[chr1:16128191], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More