EnhancerDB
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  3. rs6679564[chr1:39617080]
Enhancers that have rs6679564[chr1:39617080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6679564[chr1:39617080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39617070 39617085 MEF2C JASPAR yes 28259076
chr1 39617071 39617086 MEF2A JASPAR yes 28259077
chr1 39617072 39617084 MEF2A JASPAR yes 28259081
chr1 39617072 39617084 MEF2B JASPAR yes 28259082
chr1 39617072 39617084 MEF2D JASPAR yes 28259083
chr1 39617073 39617083 MEF2A JASPAR yes 28259084
Genes associated with rs6679564[chr1:39617080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More