EnhancerDB
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  3. rs6679925[chr1:244487194]
Enhancers that have rs6679925[chr1:244487194]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244477784 244495570 enh12850
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs6679925[chr1:244487194]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244486955 244487373 ZNF274 GTRD no Blood (GM12878) 21405435
chr1 244487181 244487194 NFKB1 JASPAR yes 36727564
chr1 244487187 244487197 ID4 JASPAR yes 36727566
chr1 244487188 244487197 SNAI2 JASPAR yes 36727567
chr1 244487189 244487194 USF2 TRANSFAC yes 36727568
Genes associated with rs6679925[chr1:244487194], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More