EnhancerDB
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  3. rs6681720[chr1:173384422]
Enhancers that have rs6681720[chr1:173384422]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs6681720[chr1:173384422]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173384326 173384570 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351292
chr1 173384420 173384432 NHLH1 JASPAR yes 33197314
chr1 173384421 173384431 TFAP4 JASPAR yes 33197315
Genes associated with rs6681720[chr1:173384422], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More