EnhancerDB
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Enhancers that have rs66827053[chr17:43250653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs66827053[chr17:43250653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43247783 43250788 POLR2A UCSC Txn Factor no Conserved 108263878
chr17 43250006 43250670 TAF1 UCSC Txn Factor no Conserved 108263908
chr17 43250153 43250657 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763226
chr17 43250153 43250657 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263952
chr17 43250200 43250716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763230
chr17 43250200 43250716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263958
chr17 43250230 43250694 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21763231
chr17 43250230 43250694 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108263961
chr17 43250230 43250760 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763232
chr17 43250230 43250760 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263962
chr17 43250264 43250788 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21763233
chr17 43250264 43250788 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108263963
chr17 43250314 43250670 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763234
chr17 43250314 43250670 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263964
chr17 43250360 43250864 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763235
chr17 43250421 43250711 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21763236
chr17 43250646 43250667 ZNF263 JASPAR yes 54433033
Genes associated with rs66827053[chr17:43250653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More