EnhancerDB
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  3. rs6683613[chr1:24615581]
Enhancers that have rs6683613[chr1:24615581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6683613[chr1:24615581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24615573 24615581 MEIS2 JASPAR yes 27496435
chr1 24615573 24615581 MEIS3 JASPAR yes 27496436
chr1 24615574 24615586 PKNOX1 JASPAR yes 27496437
chr1 24615574 24615586 PKNOX2 JASPAR yes 27496438
chr1 24615574 24615586 TGIF1 JASPAR yes 27496439
chr1 24615574 24615586 TGIF2 JASPAR yes 27496440
chr1 24615575 24615585 TFAP4 JASPAR yes 27496441
Genes associated with rs6683613[chr1:24615581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More