EnhancerDB
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  3. rs6683742[chr1:117426485]
Enhancers that have rs6683742[chr1:117426485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs6683742[chr1:117426485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117425152 117428810 ZNF274 GTRD no Bone Marrow (K562) 21334101
chr1 117426233 117426656 ZNF274 GTRD no Bone Marrow (K562) 21334103
chr1 117426471 117426486 MEF2C JASPAR yes 31848764
chr1 117426482 117426492 ETV6 JASPAR yes 31848765
chr1 117426482 117426495 ELF1 JASPAR yes 31848766
chr1 117426483 117426490 SPI1 JASPAR yes 31848767
chr1 117426483 117426491 EHF JASPAR yes 31848768
chr1 117426485 117426492 SPIB JASPAR yes 31848769
Genes associated with rs6683742[chr1:117426485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More