EnhancerDB
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  3. rs6684160[chr1:236083092]
Enhancers that have rs6684160[chr1:236083092]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236062005 236089295 enh12805
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs6684160[chr1:236083092]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236082763 236083099 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21403928
chr1 236082763 236083099 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107886251
chr1 236083088 236083098 CLOCK JASPAR yes 36388062
chr1 236083088 236083098 MYF6 JASPAR yes 36388063
chr1 236083088 236083098 NEUROG2 JASPAR yes 36388064
chr1 236083088 236083100 TAL1 JASPAR yes 36388065
chr1 236083089 236083099 MAX JASPAR yes 36388066
Genes associated with rs6684160[chr1:236083092], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More