EnhancerDB
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  3. rs6685673[chr1:117392259]
Enhancers that have rs6685673[chr1:117392259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6685673[chr1:117392259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117392253 117392273 TP53 JASPAR yes 31844234
chr1 117392256 117392266 OLIG3 JASPAR yes 31844235
Genes associated with rs6685673[chr1:117392259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More