EnhancerDB
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  3. rs6689087[chr1:234632341]
Enhancers that have rs6689087[chr1:234632341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6689087[chr1:234632341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234631274 234632668 TCF7L2 GTRD no Colon (HCT116) 21393347
chr1 234631274 234632668 TCF7L2 GTRD no Colon (HCT116) 107880039
chr1 234631301 234632484 ZBTB33 GTRD no Brain (SK-N-SH) 21393350
chr1 234631301 234632484 ZBTB33 GTRD no Brain (SK-N-SH) 107880042
chr1 234631308 234632607 ZNF274 GTRD no Liver (HepG2) 21393351
chr1 234631308 234632607 ZNF274 GTRD no Liver (HepG2) 107880043
chr1 234631324 234632370 ZBTB33 GTRD no Lung (A549) 107880044
chr1 234631329 234632425 ZBTB33 GTRD no Lung (A549) 107880045
chr1 234631354 234632350 ZNF274 GTRD no Cervix (HeLa-S3) 21393352
chr1 234631354 234632350 ZNF274 GTRD no Cervix (HeLa-S3) 107880046
chr1 234631398 234632533 ZBTB33 GTRD no Brain (SK-N-SH) 21393356
chr1 234631398 234632533 ZBTB33 GTRD no Brain (SK-N-SH) 107880050
chr1 234631441 234632478 ZBTB33 GTRD no Lung (A549) 107880055
chr1 234631461 234632399 ZNF274 GTRD no Liver (HepG2) 21393363
chr1 234631461 234632399 ZNF274 GTRD no Liver (HepG2) 107880059
chr1 234631465 234632346 ZBTB33 GTRD no Brain (SK-N-SH) 21393364
chr1 234631465 234632346 ZBTB33 GTRD no Brain (SK-N-SH) 107880060
chr1 234631468 234632370 ZBTB33 GTRD no Lung (A549) 107880061
chr1 234631494 234632426 ZNF274 GTRD no Liver (HepG2) 21393366
chr1 234631494 234632426 ZNF274 GTRD no Liver (HepG2) 107880063
chr1 234631508 234632360 ZBTB33 GTRD no Brain (SK-N-SH) 21393368
chr1 234631508 234632360 ZBTB33 GTRD no Brain (SK-N-SH) 107880065
chr1 234631549 234632446 ZBTB33 GTRD no Brain (SK-N-SH) 21393369
chr1 234631552 234632360 ZNF274 GTRD no Cervix (HeLa-S3) 21393371
chr1 234631560 234632342 ZBTB33 GTRD no Brain (SK-N-SH) 21393374
chr1 234631602 234632356 ZNF274 GTRD no Liver (HepG2) 21393382
chr1 234631608 234632358 ZNF274 GTRD no Bone Marrow (K562) 21393384
chr1 234631701 234632744 ZNF274 GTRD no Bone Marrow (K562) 21393404
chr1 234632341 234632353 NHLH1 JASPAR yes 36279014
Genes associated with rs6689087[chr1:234632341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More