EnhancerDB
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  3. rs6689955[chr1:16128224]
Enhancers that have rs6689955[chr1:16128224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6689955[chr1:16128224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16128210 16128225 FOXA1 JASPAR yes 27003178
chr1 16128211 16128225 POU4F1 JASPAR yes 27003180
chr1 16128211 16128226 FOXP1 JASPAR yes 27003181
chr1 16128211 16128226 HNF1A JASPAR yes 27003182
chr1 16128212 16128224 FOXC2 JASPAR yes 27003183
chr1 16128212 16128226 ONECUT2 JASPAR yes 27003184
chr1 16128212 16128226 ONECUT3 JASPAR yes 27003185
chr1 16128213 16128224 FOXB1 JASPAR yes 27003186
chr1 16128213 16128224 FOXC1 JASPAR yes 27003187
chr1 16128213 16128224 PROP1 JASPAR yes 27003188
chr1 16128214 16128229 FOXA1 JASPAR yes 27003190
chr1 16128215 16128227 FOXI1 JASPAR yes 27003191
chr1 16128215 16128230 FOXP1 JASPAR yes 27003192
chr1 16128216 16128228 FOXC2 JASPAR yes 27003193
chr1 16128216 16128230 ONECUT2 JASPAR yes 27003194
chr1 16128216 16128230 ONECUT3 JASPAR yes 27003195
chr1 16128217 16128228 FOXB1 JASPAR yes 27003196
chr1 16128217 16128228 FOXC1 JASPAR yes 27003197
chr1 16128220 16128232 FOXC2 JASPAR yes 27003199
chr1 16128222 16128226 YY1 TRANSFAC yes 27003200
Genes associated with rs6689955[chr1:16128224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More