EnhancerDB
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  3. rs6692548[chr1:19719798]
Enhancers that have rs6692548[chr1:19719798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6692548[chr1:19719798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19719788 19719800 NHLH1 JASPAR yes 27184652
chr1 19719789 19719799 MSC JASPAR yes 27184653
chr1 19719789 19719799 NHLH1 JASPAR yes 27184654
chr1 19719789 19719799 TFAP4 JASPAR yes 27184655
Genes associated with rs6692548[chr1:19719798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More