EnhancerDB
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  3. rs6724578[chr2:38678399]
Enhancers that have rs6724578[chr2:38678399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6724578[chr2:38678399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38678382 38678402 RREB1 JASPAR yes 73142456
chr2 38678386 38678406 RREB1 JASPAR yes 73142457
chr2 38678388 38678403 RUNX2 JASPAR yes 73142458
chr2 38678389 38678401 FOXI1 JASPAR yes 73142460
chr2 38678389 38678404 FOXP1 JASPAR yes 73142461
chr2 38678392 38678404 IRF1 JASPAR yes 73142462
chr2 38678393 38678414 IRF1 JASPAR yes 73142463
chr2 38678394 38678415 IRF1 JASPAR yes 73142464
chr2 38678395 38678410 STAT2 JASPAR yes 73142465
chr2 38678398 38678413 FOXP1 JASPAR yes 73142466
chr2 38678399 38678414 FOXP1 JASPAR yes 73142467
Genes associated with rs6724578[chr2:38678399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More