EnhancerDB
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  3. rs672465[chr1:234685783]
Enhancers that have rs672465[chr1:234685783]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs672465[chr1:234685783]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234683636 234685965 TEF1 GTRD no Bone (Osteoblast) 21394369
chr1 234685506 234686226 ZNF274 GTRD no Bone Marrow (K562) 21394493
chr1 234685506 234686226 ZNF274 GTRD no Bone Marrow (K562) 107880441
chr1 234685707 234686517 ZNF274 GTRD no Bone Marrow (K562) 21394494
chr1 234685707 234686517 ZNF274 GTRD no Bone Marrow (K562) 107880442
chr1 234685737 234686590 ZNF274 GTRD no Bone Marrow (K562) 21394495
chr1 234685737 234686590 ZNF274 GTRD no Bone Marrow (K562) 107880443
chr1 234685741 234686543 ZNF274 GTRD no Bone Marrow (K562) 21394496
chr1 234685741 234686543 ZNF274 GTRD no Bone Marrow (K562) 107880444
chr1 234685763 234685784 REST JASPAR yes 36287323
chr1 234685764 234685783 REST JASPAR yes 36287324
chr1 234685782 234685792 ID4 JASPAR yes 36287328
chr1 234685782 234685792 TCF3 JASPAR yes 36287329
chr1 234685782 234685792 TCF4 JASPAR yes 36287330
chr1 234685783 234685792 SNAI2 JASPAR yes 36287331
Genes associated with rs672465[chr1:234685783], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More