EnhancerDB
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  3. rs672955[chr6:112308562]
Enhancers that have rs672955[chr6:112308562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs672955[chr6:112308562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112308551 112308566 PRDM1 JASPAR yes 104394607
chr6 112308556 112308562 TCF4 TRANSFAC yes 104394608
chr6 112308560 112308578 NR3C1 JASPAR yes 104394609
Genes associated with rs672955[chr6:112308562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More