EnhancerDB
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  3. rs6778704[chr3:189772008]
Enhancers that have rs6778704[chr3:189772008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189764625 189785155 enh36259
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Colon (HCT116) Pancreas (Panc1) Uterus Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs6778704[chr3:189772008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189771999 189772009 LHX6 JASPAR yes 8616055
chr3 189772001 189772011 PAX3 JASPAR yes 8616056
chr3 189772001 189772012 PHOX2A JASPAR yes 8616057
Genes associated with rs6778704[chr3:189772008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 190231840 190375843 + IL1RAP ENSG00000196083.5 190231840 459832 Esophagus 0.0583265 4378