EnhancerDB
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  3. rs6779340[chr3:58033701]
Enhancers that have rs6779340[chr3:58033701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6779340[chr3:58033701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58033693 58033708 RUNX2 JASPAR yes 2669214
chr3 58033694 58033703 RUNX2 JASPAR yes 2669216
chr3 58033694 58033704 RUNX3 JASPAR yes 2669217
chr3 58033694 58033705 RUNX1 JASPAR yes 2669218
Genes associated with rs6779340[chr3:58033701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More