EnhancerDB
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  3. rs67968020[chr12:53955706]
Enhancers that have rs67968020[chr12:53955706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs67968020[chr12:53955706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53954615 53955949 TCF7L2 GTRD no Colon (HCT116) 21549439
chr12 53954615 53955949 TCF7L2 GTRD no Colon (HCT116) 108036194
chr12 53954676 53955824 ZNF143 GTRD no Epithelial (MCF-7) 21549440
chr12 53954676 53955824 ZNF143 GTRD no Epithelial (MCF-7) 108036195
chr12 53954900 53955903 TCF7L2 GTRD no Colon (HCT116) 21549442
chr12 53954900 53955903 TCF7L2 GTRD no Colon (HCT116) 108036197
chr12 53955252 53955736 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036202
chr12 53955263 53955919 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036203
chr12 53955283 53955823 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036204
chr12 53955285 53955881 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21549447
chr12 53955285 53955881 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108036205
chr12 53955289 53955865 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036206
chr12 53955312 53955816 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036207
chr12 53955316 53955856 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036208
chr12 53955327 53955847 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036209
chr12 53955328 53955812 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036210
chr12 53955361 53955737 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549449
chr12 53955361 53955737 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036212
chr12 53955367 53955750 FOSL2 UCSC Txn Factor no Conserved 108036213
chr12 53955367 53955750 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036214
chr12 53955378 53955736 JUN UCSC Txn Factor no Conserved 108036216
chr12 53955379 53955709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549451
chr12 53955379 53955709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036217
chr12 53955396 53955736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549452
chr12 53955396 53955736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036218
chr12 53955406 53955762 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108036219
chr12 53955425 53955734 TCF12 UCSC Txn Factor no Conserved 108036227
chr12 53955425 53955734 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036228
chr12 53955445 53955815 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036232
chr12 53955699 53955711 E2F8 JASPAR yes 120991037
chr12 53955699 53955713 E2F7 JASPAR yes 120991038
chr12 53955700 53955712 E2F8 JASPAR yes 120991039
Genes associated with rs67968020[chr12:53955706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More