EnhancerDB
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  3. rs68096947[chr6:16690320]
Enhancers that have rs68096947[chr6:16690320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16690265 16690543 vista51167
VISTA
Transcript factors that have rs68096947[chr6:16690320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16690311 16690326 LEF1 JASPAR yes 70326631
chr6 16690311 16690326 LEF1 JASPAR yes 100327949
chr6 16690312 16690326 TCF7L2 JASPAR yes 70326632
chr6 16690312 16690326 TCF7L2 JASPAR yes 100327950
chr6 16690318 16690330 FOXI1 JASPAR yes 70326633
chr6 16690318 16690330 FOXI1 JASPAR yes 100327951
chr6 16690320 16690328 FOXG1 JASPAR yes 70326634
chr6 16690320 16690328 FOXG1 JASPAR yes 100327952
Genes associated with rs68096947[chr6:16690320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More