EnhancerDB
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  3. rs6838520[chr4:148679822]
Enhancers that have rs6838520[chr4:148679822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148667325 148718095 enh37177
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs6838520[chr4:148679822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148679820 148679836 POU4F2 JASPAR yes 93517850
chr4 148679820 148679836 POU4F3 JASPAR yes 93517851
chr4 148679821 148679831 PAX7 JASPAR yes 93517852
Genes associated with rs6838520[chr4:148679822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More