EnhancerDB
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  3. rs6873680[chr5:77815215]
Enhancers that have rs6873680[chr5:77815215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77815161 77815372 vista48143
VISTA
Transcript factors that have rs6873680[chr5:77815215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77814956 77815219 RUNX3 UCSC Txn Factor no Conserved 108535454
chr5 77815213 77815217 TEAD2 TRANSFAC yes 63595742
chr5 77815213 77815217 TEAD2 TRANSFAC yes 70668463
chr5 77815213 77815232 RFX2 JASPAR yes 63595743
chr5 77815213 77815232 RFX2 JASPAR yes 70668464
chr5 77815215 77815218 MYB TRANSFAC yes 63595744
chr5 77815215 77815218 MYB TRANSFAC yes 70668465
chr5 77815215 77815227 YY1 JASPAR yes 63595745
chr5 77815215 77815227 YY1 JASPAR yes 70668466
Genes associated with rs6873680[chr5:77815215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More