EnhancerDB
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  3. rs688811[chr1:39647779]
Enhancers that have rs688811[chr1:39647779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs688811[chr1:39647779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39647770 39647785 JUND JASPAR yes 28263487
chr1 39647771 39647784 JUN JASPAR yes 28263488
chr1 39647772 39647785 ATF4 JASPAR yes 28263489
chr1 39647772 39647786 ATF7 JASPAR yes 28263490
chr1 39647772 39647786 BATF3 JASPAR yes 28263491
chr1 39647773 39647785 HLF JASPAR yes 28263492
chr1 39647773 39647785 JDP2 JASPAR yes 28263493
chr1 39647775 39647783 CREB1 JASPAR yes 28263494
Genes associated with rs688811[chr1:39647779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More