EnhancerDB
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  3. rs6890949[chr5:171845336]
Enhancers that have rs6890949[chr5:171845336]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171823725 171849015 enh22806
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 171845132 171845429 vista50145
VISTA
Transcript factors that have rs6890949[chr5:171845336]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171845325 171845340 NFYB JASPAR yes 67787569
chr5 171845325 171845340 NFYB JASPAR yes 70761632
chr5 171845327 171845343 NFYA JASPAR yes 67787570
chr5 171845327 171845343 NFYA JASPAR yes 70761633
chr5 171845328 171845346 NFYA JASPAR yes 67787571
chr5 171845328 171845346 NFYA JASPAR yes 70761634
chr5 171845332 171845336 H1TF2 TRANSFAC yes 67787572
chr5 171845332 171845336 NFE TRANSFAC yes 67787573
chr5 171845332 171845336 SRF TRANSFAC yes 67787574
chr5 171845332 171845336 H1TF2 TRANSFAC yes 70761635
chr5 171845332 171845336 NFE TRANSFAC yes 70761636
chr5 171845332 171845336 SRF TRANSFAC yes 70761637
Genes associated with rs6890949[chr5:171845336], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More