EnhancerDB
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  3. rs6949239[chr7:101519622]
Enhancers that have rs6949239[chr7:101519622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 101495145 101554255 enh9948
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6949239[chr7:101519622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 101519606 101519627 IRF1 JASPAR yes 16804499
chr7 101519611 101519626 FOXP1 JASPAR yes 16804501
chr7 101519611 101519632 IRF1 JASPAR yes 16804502
chr7 101519612 101519633 IRF1 JASPAR yes 16804503
chr7 101519613 101519625 FOXC2 JASPAR yes 16804504
chr7 101519613 101519633 RREB1 JASPAR yes 16804505
chr7 101519614 101519625 FOXP2 JASPAR yes 16804506
chr7 101519616 101519631 FOXP1 JASPAR yes 16804507
chr7 101519617 101519638 IRF1 JASPAR yes 16804508
chr7 101519619 101519634 IRF9 JASPAR yes 16804509
Genes associated with rs6949239[chr7:101519622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More