EnhancerDB
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  3. rs71002936[chr1:16129758]
Enhancers that have rs71002936[chr1:16129758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71002936[chr1:16129758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16129738 16129759 IRF1 JASPAR yes 27003384
chr1 16129740 16129761 IRF1 JASPAR yes 27003386
chr1 16129744 16129765 IRF1 JASPAR yes 27003387
chr1 16129745 16129760 FOXP1 JASPAR yes 27003388
chr1 16129746 16129767 IRF1 JASPAR yes 27003389
chr1 16129747 16129762 FOXP1 JASPAR yes 27003390
chr1 16129748 16129763 FOXP1 JASPAR yes 27003391
chr1 16129748 16129769 IRF1 JASPAR yes 27003392
chr1 16129753 16129768 FOXP1 JASPAR yes 27003393
Genes associated with rs71002936[chr1:16129758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More